Indiana University

PTI Bibliography

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2010
Ekanayake, J., Architecture and Performance of Runtime Environments for Data Intensive Scalable Computing, PhD Exam, Indiana University, School of Informatics and Computing , Bloomington, IN, Dec 20 2010.  Download: thesis-presentation-reduced.pptx (2.27 MB)
Ekanayake, J., T. Gunarathne, and J. Qiu, "Cloud Technologies for Bioinformatics Applications" IEEE Transactions on Parallel and Distributed Systems, vol. PP, no. PP, pp. 1-1, Oct 2010. Abstract
Pallickara, S., J. Ekanayake, and G. C. Fox, "Granules: A Lightweight Runtime for Scalable Computing with Support for Map-Reduce" Cloud Computing and Software Services: Theory and Techniques: CRC Press (Taylor and Francis), Jul 2010.
Ekanayake, J., X. Qiu, T. Gunarathne, S. Beason, and G. C. Fox, "High Performance Parallel Computing with Clouds and Cloud Technologies" Cloud Computing and Software Services: Theory and Techniques: CRC Press (Taylor and Francis), Jul 2010. Abstract
Qiu, J., T. Gunarathne, J. Ekanayake, J. Y. Choi, S. - H. Bae, H. Li, B. Zhang, Y. Ryan, S. Ekanayake, T. - L. Wu, et al., "Hybrid Cloud and Cluster Computing Paradigms for Life Science Applications" the 11th Annual Bioinformatics Open Source Conference , Boston, MA, Jul 2010.
Ekanayake, J., Twister: A Runtime for Iterative MapReduce, MAPREDUCE’10 Workshop, The ACM International Symposium on High Performance Distributed Computing (HPDC), Chicago, IL, Jun 22 2010.  Download: hpdc-mapreduce-2010.pptx (877.31 KB)
Ekanayake, J., H. Li, B. Zhang, T. Gunarathne, S. - H. Bae, J. Qiu, and G. C. Fox, "Twister: A Runtime for Iterative MapReduce" The ACM International Symposium on High Performance Distributed Computing (HPDC), Chicago, Jun 2010. Abstract
Qiu, J., T. Gunarathne, J. Ekanayake, J. Y. Choi, S. - H. Bae, H. Li, B. Zhang, Y. Ryan, S. Ekanayake, T. - L. Wu, et al., Hybrid Cloud and Cluster Computing Paradigms for Life Science Applications , Bloomington, IN, Indiana University, Apr 17 2010.
Ekanayake, J., H. Li, B. Zhang, T. Gunarathne, S. - H. Bae, J. Qiu, and G. C. Fox, Twister: A Runtime for Iterative MapReduce , Bloomington, IN, Indiana University, Mar 18 2010. Abstract
Fox, G. C., J. Qiu, S. Beason, S. - H. Bae, J. Y. Choi, J. Ekanayake, S. Ekanayake, T. Gunarathne, B. Zhang, H. Li, et al., SALSA and Cheminformatics, Innovation Center, Indiana University, Bloomington, IN, Feb 12 2010.  Download: disease-gene_analysis.pptx (714.67 KB)
Fox, G. C., J. Qiu, S. Beason, J. Ekanayake, T. Gunarathne, J. Y. Choi, S. - H. Bae, Y. Ruan, H. Li, B. Zhang, et al., SALSA Group’s Collaborations with Microsoft, Feb 05 2010.  Download: multicoreprojectreport_feb5_2010.pptx (1.46 MB)
Qiu, J., S. Beason, J. Ekanayake, T. Gunarathne, J. Y. Choi, S. - H. Bae, Y. Ruan, H. Li, B. Zhang, S. Ekanayake, et al., SALSA Group’s Collaborations with Microsoft, Innovation Center, Indiana University, Bloomington, IN, Feb 02 2010.
Ekanayake, J., T. Gunarathne, J. Qiu, G. C. Fox, S. Beason, J. Y. Choi, Y. Ruan, S. - H. Bae, and H. Li, Applicability of DryadLINQ to Scientific Applications , Bloomington, IN, Indiana University, Jan 30 2010.
Ekanayake, J., T. Gunarathne, and J. Qiu, Cloud Technologies for Bioinformatics Applications , Bloomington, IN, Indiana University, Jan 04 2010. Abstract
2009
Ekanayake, J., T. Gunarathne, A. S. Balkir, G. C. Fox, C. Poulain, N. Araujo, and R. Barga, "DryadLINQ for Scientific Analyses" 5th IEEE International Conference on e-Science, Oxford UK, Dec 9-11 2009. Abstract
Qiu, J., J. Ekanayake, T. Gunarathne, J. Y. Choi, S. - H. Bae, Y. Ruan, S. Ekanayake, S. Wu, S. Beason, G. C. Fox, et al., Data Intensive Computing for Bioinformatics , Bloomington, IN, Indiana University, Dec 29 2009.
Fox, G. C., X. Qiu, S. Beason, J. Y. Choi, J. Ekanayake, T. Gunarathne, M. Rho, H. Tang, N. Devadasan, and G. Liu, "Biomedical Case Studies in Data Intensive Computing" The 1st International Conference on Cloud Computing (CloudCom 2009) , vol. 5931/2009, Beijing Jiaotong University, China, Springer Berlin / Heidelberg, pp. 2-18, Dec 1-4 2009. Abstract
Ekanayake, J., and G. C. Fox, Architecture and Performance of Runtime Environments for Data Intensive Scalable Computing, Advisor: Geoffrey Fox, Doctoral Showcase SC09, http://sc09.supercomputing.org/, Portland Oregon, Nov 18 2009.  Download: sc09-doc-symposium.pptx (1.06 MB)
Qiu, J., J. Ekanayake, T. Gunarathne, G. C. Fox, S. Beason, J. Y. Choi, Y. Ruan, S. - H. Bae, and H. Li, SALSA Group Poster/Demo, SC09 Conference Indiana University Booth, http://sc09.supercomputing.org/, Portland Oregon, Nov 16 2009.  Download: sc09-salsa-demo-final-fixed.pptx (2.42 MB)
Qiu, X., J. Ekanayake, T. Gunarathne, S. - H. Bae, J. Y. Choi, S. Beason, and G. C. Fox, "Using MapReduce Technologies in Bioinformatics and Medical Informatics" The International Conference for High Performance Computing, Networking, Storage and Analysis (SC'09), Portland, OR, Nov 16 2009.
Qiu, J., J. Ekanayake, T. Gunarathne, G. C. Fox, S. Beason, J. Y. Choi, Y. Ruan, S. - H. Bae, and H. Li, "Science in Clouds"SALSA Group Poster/Demo, Portland, OR, Indiana University, The International Conference for High Performance Computing, Networking, Storage and Analysis (SC'09), Portland, OR USA, Nov 16-20 2009.
Ekanayake, J., Architecture and Performance of Runtime Environments for Data Intensive Scalable Computing, Doctoral Showcase SC09, http://sc09.supercomputing.org/, Portland Oregon, Nov 14 2009.  Download: SC09-slides-jaliya-ekanayake.pdf (673.65 KB)
Ekanayake, J., "Architecture and Performance of Runtime Environments for Data Intensive Scalable Computing"Supercomputing'09, (Advisor Geoffrey Fox), Portland, OR, Doctoral Showcase, The International Conference for High Performance Computing, Networking, Storage and Analysis (SC'09), Portland, OR USA , Nov 09, 2009. Abstract
Qiu, X., J. Ekanayake, S. Beason, T. Gunarathne, G. C. Fox, R. Barga, and D. Gannon, "Cloud Technologies for Bioinformatics Applications" 2nd ACM Workshop on Many-Task Computing on Grids and Supercomputers (Supercomputing'09), Portland, OR, Nov 09, 2009. Abstract
Kurze, T., L. Wang, G. von Laszewski, J. Tao, M. Kunze, F. Wang, and J. Ekanayake, Cyberaide Virtual Applicance: On-demand Deploying Middleware for Cyberinfrastructure, First International Conference on Cloud Computing (CloudComp’09), Munich, Germany, Oct 2009.  Download: wang-lizhe-cloudcomp.pptx (2.05 MB)